Learn More About NanoString's Platforms
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Training Videos
Access all our how-to videos and full length training courses here!
GeoMx® Digital Spatial Profiler
Course
nCounter Analysis System
Document Library
Check here for nCounter and GeoMx resource documents.
Site Readiness Portal
Congratulations on purchasing your new GeoMx® DSP! Visit this page to start preparing for your upcoming training.
30-60-90 Day Onboarding Plan
Welcome! Click here for Application Scientist Onboarding
Ex: GeoMx DSP Workflow for Protein with Manual Slide Preparation and nCounter Readout
Manual Slide Prep
Protein
Dr. Alexandre Hirayama, MD: Understanding the Efficacy of CAR-T Cell Therapy for LBCL
Learn how the nCounter® Analysis System was used to study how the tumor microenvironment impacts outcomes of CD19 CAR-T cell therapy for patients with large B-cell lymphoma.
Webinar
nCounter® SPRINT Profiler
nCounter® Pro/MAX/FLEX
Basic user
nCounter Analysis System
NanoString Webinars
Check out recorded content showcasing the NanoString technology!
GeoMx® Digital Spatial Profiler
Webinar
GeoMx Whole Transcriptome Atlas
Data Analysis
nCounter® SPRINT Profiler
nCounter® Pro/MAX/FLEX
Sign Up For Your In-Person Demo In The Customer Experience Lab!
Click here to claim your spot in the next demo hosted by the Customer Experience lab in Seattle or Amsterdam.
GeoMx® Data Analysis for nCounter Readout
Overview and Software Demonstration
91 min
GeoMx® Digital Spatial Profiler
Data Analysis
Basic user
GeoMx® DSP: Data Analysis for NGS Readout
This course covers GeoMx® DSP data analysis for RNA-NGS readout.
60 min
GeoMx® Digital Spatial Profiler
Data Analysis
GeoMx Readout: NGS
Basic user
GeoMx Academy: NGS Workflow for RNA with Manual Slide Preparation
1 Course
Learning Path
Ex: GeoMx DSP NGS Workflow for Protein with Manual Slide Preparation
GeoMx Readout: NGS
Manual Slide Prep
Protein
Ex: Semi-Automated GeoMx DSP Workflow for Protein with nCounter Readout
Leica BOND RX
GeoMx Readout: nCounter
Protein
Christopher E. Mason, PhD: Spatial and Multi-Omic Profiling of Skin and Blood During Human Spaceflight
Hear how the GeoMx® DSP was used to better understand what happens in the human body during spaceflight.
GeoMx® Digital Spatial Profiler
Webinar
Running CodeSet Assays on the nCounter® Pro/MAX/FLEX
This course covers the reagents, set-up, and instrument steps of a CodeSet assay run on the nCounter MAX/FLEX/Pro. Let's get started!
66 min
nCounter® Pro/MAX/FLEX
Instrument Operation
Basic user
Course
Sample Prep
CosMx® SMI: Protein FFPE with Manual Slide Prep
3 Courses
Ex: Semi-Automated GeoMx DSP NGS Workflow for Protein with Leica Biosystems
GeoMx Readout: NGS
Leica BOND RX
Protein
Clone of GeoMx Academy: NGS Data Analysis
Join this course to learn more about analyzing your GeoMx NGS Data!
2 hr 0 min
Dr. Chen Zhao, MD: Interrogating Tumor-Immune Interactions in AML Patients Receiving Immune Checkpoint Inhibitors
Learn how the GeoMx® DSP was used to study the tumor-immune microenvironment in acute myeloid leukemia.
GeoMx® Digital Spatial Profiler
Webinar
Basic user
GeoMx Digital Spatial Profiler Software Updates v2.4
Click here to upgrade to GeoMx DSP Software v2.4
GeoMx Digital Spatial Profiler Software Updates v2.2
Click here to upgrade to GeoMx DSP Software v2.2
GeoMx nCounter Readout User Manual
MAN-10089-10 | Nov 2023
GeoMx® Digital Spatial Profiler
Manuals & Instructions
Document
GeoMx Digital Spatial Profiler
Brief overview of the platform
2 min
GeoMx® Digital Spatial Profiler
Demo
Introducing the GeoMx Whole Transcriptome Atlas
Enjoy this musical introduction to the 18,000+ plex GeoMx assay!
2 min
GeoMx® Digital Spatial Profiler
GeoMx Whole Transcriptome Atlas
GeoMx® DSP 101: Introduction to the Technology
This course will introduce you to the GeoMx® Digital Spatial Profiler to provide you with a basic understanding of the technology.
11 min
GeoMx® Digital Spatial Profiler
Introductory
Course
Ex: Fully Automated GeoMx DSP NGS Workflow for RNA with Leica Biosystems
GeoMx Readout: NGS
Leica BOND RX
RNA
nCounter® FAQ Database
Click here to visit the FAQ page.
GeoMx NGS Pipeline on Illumina DRAGEN User Manual
RPP-00535-02 | This document has been replaced by the GeoMx NGS Readout User Manual (MAN-10153).
GeoMx® Digital Spatial Profiler
Manuals & Instructions
GeoMx Readout: NGS
Document
Ex: GeoMx DSP Workflow for RNA with Manual Slide Preparation and nCounter Readout
GeoMx Readout: nCounter
Manual Slide Prep
RNA
GeoMx DSP Operation Guide for Service Providers
MK2689 | Aug 2020
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
CRO/Core Lab Resources
Document
nCounter MAX/FLEX Analysis System User Manual
MAN-C0035-09 | Apr 2023
nCounter® Pro/MAX/FLEX
Manuals & Instructions
Instrument Operation
Document
Spatial Profiling of COVID-19 Samples: Experimental Designs to Capture Regional Heterogeneity with the GeoMx DSP
MK2794 | Sept 2020
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
COVID-19
Document
Introduction to the GeoMx Digital Spatial Profiler: Morphology-Driven Spatial Genomics and Proteomics
Wes Goldman, Senior Technical Sales Specialist
30 min
GeoMx® Digital Spatial Profiler
GeoMx Whole Transcriptome Atlas
GeoMx® Cancer Transcriptome Atlas
Introductory
Course
nCounter® 101: Introduction to the Technology
This course will introduce you to the nCounter® Analysis System to provide you with a basic understanding of the technology.
21 min
Introductory
Course
nCounter Analysis System
Test Quiz with Feedback
Molecularly Guided Highly Multiplexed Spatial Profiling with the RNAscope and GeoMx Assays
MK1413 | Aug 2019
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
RNAscope
Document
Sample Prep
GeoMx NGS Pipeline Software User Manual
MAN-10118-03 | This document has been replaced by the GeoMx NGS Readout User Manual (MAN-10153).
GeoMx® Digital Spatial Profiler
Manuals & Instructions
GeoMx Readout: NGS
Document
The Cancer Transcriptome Atlas: Deep Spatial Characterization of the Colorectal Cancer Tumor Microenvironment
MK2414 | May 2020
GeoMx® Digital Spatial Profiler
GeoMx® Cancer Transcriptome Atlas
White Papers and Tech Notes
Document
Grant Writing with NanoString Technologies
Resources to help prepare successful grant applications
38 min
GeoMx® Digital Spatial Profiler
Instrument Operation
[separator] Getting Started: Introductory Courses
New to NanoString? Check out the courses below to start learning about NanoString's platforms!
separator
GeoMx DSP Applications in Organoid Research
NanoString scientist LiuLiu Pan, PhD, discusses GeoMx DSP applications for the study of gene expression in organoids.
4 min
GeoMx® Digital Spatial Profiler
Basic user
Organoid
Course
Preparing RNA from FFPE Samples
This manual has been replaced with "Preparing RNA for nCounter Assays from FFPE or Fresh Frozen Samples" (MAN-10050-06).
nCounter® SPRINT Profiler
nCounter® Pro/MAX/FLEX
Manuals & Instructions
nCounter CodeSet
Document
Sample Prep
Preparing RNA and Lysates from Fresh Frozen Samples
This manual has been replaced with "Preparing Cell Lysates for nCounter Assays (Lyse and Go Protocol)" (MAN-10051-06).
nCounter® SPRINT Profiler
nCounter® Pro/MAX/FLEX
Manuals & Instructions
nCounter CodeSet
Document
Sample Prep
Ex: Semi-Automated GeoMx DSP NGS Workflow for RNA with Leica Biosystems
GeoMx Readout: NGS
Leica BOND RX
RNA
Ex: Semi-Automated GeoMx DSP Workflow for RNA with nCounter Readout
Leica BOND RX
GeoMx Readout: nCounter
RNA
Introduction to GeoMx Normalization: Protein
MK2593 | July 2020
GeoMx® Digital Spatial Profiler
Data Analysis
White Papers and Tech Notes
Document
GeoMx® Academy: NGS Data Analysis for RNA
Watch this course for a deep dive into GeoMx® Data Analysis for the NGS Assay
98 min
GeoMx Readout: NGS
Site Readiness: GeoMx® DSP RNA-NGS Manual Workflow
5 Courses
GeoMx Readout: NGS
Manual Slide Prep
RNA
How to Change Reagents on the GeoMx DSP
This tutorial shows how to change the buffers or reagents in the GeoMx DSP.
4 min
GeoMx® Digital Spatial Profiler
Basic user
How-To Video
The GeoMx Human Whole Transcriptome Atlas for the Digital Spatial Profiler: Design, Performance, and Experimental Guidelines
MK3209 | Sept 2022
GeoMx® Digital Spatial Profiler
GeoMx Whole Transcriptome Atlas
White Papers and Tech Notes
Document
Introduction to GeoMx Cancer Transcriptome Atlas: Normalization
MK2833 | Oct 2020
GeoMx® Digital Spatial Profiler
GeoMx® Cancer Transcriptome Atlas
Data Analysis
White Papers and Tech Notes
Document
Test Seismic Course
nCounter SPRINT Profiler User Manual
MAN-10017-10 | Apr 2022
nCounter® SPRINT Profiler
Manuals & Instructions
Instrument Operation
Document
How to overlay images in the GeoMx DSP scan workspace
Import and overlay images in the ROI selection step of the GeoMx DSP workflow.
4 min
GeoMx® Digital Spatial Profiler
Instrument Operation
How-To Video
Loading Samples into the nCounter® SPRINT Cartridge
This short course will show you how to load your samples into a nCounter SPRINT cartridge.
7 min
nCounter® SPRINT Profiler
Basic user
How-To Video
Sample Prep
How to connect to GeoMx Support using LogMeIn Rescue
This tutorial shows how to establish a connection with NanoString's GeoMx Support team using the secure LogMeIn application.
3 min
GeoMx® Digital Spatial Profiler
Instrument Operation
Basic user
How-To Video
CX Lab Experience: An Overview of the GeoMx DSP Workflow
Highlights of the GeoMx workflow with NGS Readout, from the NanoString Customer Experience Lab in Seattle
16 min
Demo
Introductory
Sample Prep
Combined Workflow of GeoMx Cancer Transcriptome Atlas and RNAscope Assays
MK2495 | May 2020
GeoMx® Digital Spatial Profiler
GeoMx® Cancer Transcriptome Atlas
White Papers and Tech Notes
RNAscope
Document
Sample Prep
Integrated and Automated Workflow for High Plex RNA and Protein Profiling
MK1433 | Mar 2019
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
Leica BOND RX
Document
Sample Prep
Multiplex, Spatially Resolved Protein Analysis with GeoMx DSP and Abcam Recombinant Monoclonal Antibodies
MK1435 | Mar 2019
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
Document
Sample Prep
Multi-step Antibody Validation for the GeoMx Digital Spatial Profiler
MK2598 | July 2020
GeoMx® Digital Spatial Profiler
White Papers and Tech Notes
Document
Sample Prep
GeoMx DSP Core Lab Starter Kit
Resources to help you launch your GeoMx Core Lab
1 hr 45 min
GeoMx® Digital Spatial Profiler
Basic user
CRO/Core Lab Resources
Course
Sample Prep
Gene Expression Panels and Custom CodeSet User Manual
MAN-10056-06 | Aug 2022
nCounter® SPRINT Profiler
nCounter® Pro/MAX/FLEX
Manuals & Instructions
nCounter CodeSet
Document
Sample Prep
nCounter® SPRINT Profiler - CodeSet Chemistry
This course will walk you through the steps for prepping your CodeSet and running it on your nCounter® SPRINT Profiler system. You will receive a certificate when you successfully complete this course. Let's get started!
59 min
nCounter® SPRINT Profiler
Basic user
Course
Sample Prep
William L. Hwang, MD, PhD: Precision Oncology in Pancreatic Cancer through Single-Cell and Spatial Omics
See how the GeoMx® DSP was used to study pancreatic ductal adenocarcinoma.
GeoMx® Digital Spatial Profiler
Webinar
Advanced user
Normalization of GeoMx DSP Protein Data using a Custom Script
This course covers best practices in GeoMx DSP protein data normalization, using the custom script feature of the data analysis software.
16 min
GeoMx® Digital Spatial Profiler
Data Analysis
Advanced user
Pharma and CRO Spatial Summit Series
Learn how 6 of our Pharma and Contract Research Organizations (CROs) customers are designing and executing GeoMx® DSP experiments for clinical studies.
153 min
GeoMx® Digital Spatial Profiler
Webinar
CosMx SMI Instrument User Manual (software v1.3)
MAN-10161-05 | Feb 2024
CosMx™ Spatial Molecular Imager
[separator] Learn How Your Peers are Using NanoString’s Platforms!
Watch the featured webinars below to see how your peers are using NanoString in their work!
separator
AtoMx SIP User Manual (software v1.2)
MAN-10170-04-1 | Feb 2024
AtoMx™ Spatial Informatics Platform
30-Day Plan
3 Courses
Step 3: Required Equipment, Materials, and Reagents for the Semi-Automated RNA-NGS Workflow
Step 1: Checklist for GeoMx® DSP Instrument Delivery and Installation
Step 4: NanoString GeoMx® DSP RNA-NGS Training Kit
Step 5: Pre-Training Preparation
Step 2: IT Requirements and Specifications
Preparing for your CosMx® SMI Run with Protein FFPE Samples
CosMx™ Spatial Molecular Imager
Day 1: CosMx SMI Run with Protein FFPE
Day 2: CosMx SMI Run with Protein FFPE
GeoMx® DSP 101: Introduction to the Technology
This course will introduce you to the GeoMx® Digital Spatial Profiler to provide you with a basic understanding of the technology.
11 min
GeoMx® Digital Spatial Profiler
Introductory
Course
Step 3: Required Equipment, Materials, and Reagents for the Semi-Automated RNA-NGS Workflow
Step 1: Checklist for GeoMx® DSP Instrument Delivery and Installation
Step 4: NanoString GeoMx® DSP RNA-NGS Training Kit
Step 5: Pre-Training Preparation
Step 2: IT Requirements and Specifications
GeoMx® DSP 101: Introduction to the Technology
This course will introduce you to the GeoMx® Digital Spatial Profiler to provide you with a basic understanding of the technology.
11 min
GeoMx® Digital Spatial Profiler
Introductory
Course
nCounter® 101: Introduction to the Technology
This course will introduce you to the nCounter® Analysis System to provide you with a basic understanding of the technology.
21 min
Introductory
Course
nCounter Analysis System
GeoMx® DSP: Data Analysis for NGS Readout
This course covers GeoMx® DSP data analysis for RNA-NGS readout.
60 min
GeoMx® Digital Spatial Profiler
Data Analysis
GeoMx Readout: NGS
Basic user
Preparing for your CosMx® SMI Run with Protein FFPE Samples
CosMx™ Spatial Molecular Imager
Day 1: CosMx SMI Run with Protein FFPE
Day 2: CosMx SMI Run with Protein FFPE
Step 3: Required Equipment, Materials, and Reagents for the Semi-Automated RNA-NGS Workflow
Step 1: Checklist for GeoMx® DSP Instrument Delivery and Installation
Step 4: NanoString GeoMx® DSP RNA-NGS Training Kit
Step 5: Pre-Training Preparation
Step 2: IT Requirements and Specifications
Preparing for your CosMx® SMI Run with Protein FFPE Samples
CosMx™ Spatial Molecular Imager
Day 1: CosMx SMI Run with Protein FFPE
Day 2: CosMx SMI Run with Protein FFPE
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